Uses of Class
org.rcsb.mmtf.spark.data.StructureDataRDD

Packages that use StructureDataRDD

Package	Description
org.rcsb.mmtf.spark.data
org.rcsb.mmtf.spark.utils

Uses of StructureDataRDD in org.rcsb.mmtf.spark.data

Methods in org.rcsb.mmtf.spark.data that return StructureDataRDD

Modifier and Type	Method	Description
StructureDataRDD	StructureDataRDD.cache()	Cache the underlying RDD.
StructureDataRDD	StructureDataRDD.filterResolution(double maxRes)	Filter the StructureDataRDD based on resolution.
StructureDataRDD	StructureDataRDD.filterResolution(double maxRes, double minRes)	Filter the StructureDataRDD based on resolution.
StructureDataRDD	StructureDataRDD.filterRfree(double maxRFree)	Filter the StructureDataRDD based on R-free.
StructureDataRDD	StructureDataRDD.filterRfree(double maxRFree, double minRFree)	Filter the StructureDataRDD based on R-free.
StructureDataRDD	StructureDataRDD.getReduced()	Covert the StructureDataRDD to the reduced format.
StructureDataRDD	StructureDataRDD.sample(double fraction)	Allow the user to sample the data.

Uses of StructureDataRDD in org.rcsb.mmtf.spark.utils

Methods in org.rcsb.mmtf.spark.utils that return StructureDataRDD

Modifier and Type	Method	Description
static StructureDataRDD	SparkUtils.getStructureObj(java.lang.String filePath)	Get the StructureDataRDD from a file path.
StructureDataRDD	SparkUtils.selectSubset(java.lang.String filePath, float subsetToChose)	Select a subset of the PDB in a fast and efficient way.
StructureDataRDD	SparkUtils.selectSubset(java.lang.String filePath, java.util.List<java.lang.String> subsetToChose)	Select a subset of the PDB in a fast and efficient way.