Uses of Class
org.rcsb.mmtf.spark.data.AtomSelectObject

Packages that use AtomSelectObject

Package	Description
org.rcsb.mmtf.spark.data
org.rcsb.mmtf.spark.utils

Uses of AtomSelectObject in org.rcsb.mmtf.spark.data

Methods in org.rcsb.mmtf.spark.data that return AtomSelectObject

Modifier and Type	Method	Description
AtomSelectObject	AtomSelectObject.atomNameList(java.lang.String[] atomNameList)	Set the array of atom names allowed.
AtomSelectObject	AtomSelectObject.atomNameList(java.util.List<java.lang.String> atomNameList)	Set the list of atom names allowed.
AtomSelectObject	AtomSelectObject.charged(boolean charged)	Set whether charged elements spuld be found
AtomSelectObject	AtomSelectObject.elementNameList(java.lang.String[] elementNameList)	Set the array of element names allowed.
AtomSelectObject	AtomSelectObject.elementNameList(java.util.List<java.lang.String> elementNameList)	Set the list of element names allowed.
AtomSelectObject	AtomSelectObject.groupNameList(java.lang.String[] groupNameList)	Set the array of group names allowed.
AtomSelectObject	AtomSelectObject.groupNameList(java.util.List<java.lang.String> groupNameList)	Set the list of group names allowed.
AtomSelectObject	AtomSelectObject.groupType(java.lang.String groupType)	Set the type of group allowed.

Uses of AtomSelectObject in org.rcsb.mmtf.spark.utils

Methods in org.rcsb.mmtf.spark.utils that return AtomSelectObject

Modifier and Type	Method	Description
AtomSelectObject	SparkUtils.generateAtomSelectObject(java.util.List<java.lang.String> atomNameList, java.util.List<java.lang.String> groupNameList, boolean charged, java.util.List<java.lang.String> elementNameList, java.lang.String groupType)	Utility function to generate an AtomSelectObject.