org.molgenis.semanticmapper.controller

Class TagWizardController

java.lang.Object

org.molgenis.web.PluginController

org.molgenis.semanticmapper.controller.TagWizardController

@Controller
 @RequestMapping(value="/plugin/tagwizard")
public class TagWizardController
extends PluginController

Field Summary

Fields

Modifier and Type	Field and Description
static String	ID
static String	URI

Fields inherited from class org.molgenis.web.PluginController

PLUGIN_URI_PREFIX

Constructor Summary

Constructors

Constructor and Description
TagWizardController()

Method Summary

Modifier and Type	Method and Description
OntologyTag	addTagAttribute(@Valid AddTagRequest request) Add a tag for a single attribute
Map<String,OntologyTag>	autoTagAttributes(@Valid AutoTagRequest request) Automatically tags all attributes in the current entity using Lucene lexical matching.
void	clearAllTags(String entityTypeId) Clears all tags from every attribute in the current target entity
void	deleteSingleTag(@Valid RemoveTagRequest request) Delete a single tag
List<OntologyTerm>	getAllOntologyTerms(@Valid GetOntologyTermRequest request) Returns ontology terms based on a search term and a selected ontology
ErrorMessageResponse	handleRuntimeException(RuntimeException e)
String	viewTagWizard(String target, org.springframework.ui.Model model) Displays on tag wizard button press

Methods inherited from class org.molgenis.web.PluginController

getId, getPluginSettings, getUri

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

ID

public static final String ID

See Also:

Constant Field Values

URI

public static final String URI

See Also:

Constant Field Values

Constructor Detail

TagWizardController

public TagWizardController()

Method Detail

viewTagWizard

@GetMapping
public String viewTagWizard(@RequestParam(required=false,value="selectedTarget")
                                        String target,
                                        org.springframework.ui.Model model)

Displays on tag wizard button press

Parameters:

target - The target entity name

model - the model

Returns:

name of the tag wizard view

addTagAttribute

@PostMapping(value="/tagattribute")
 @ResponseBody
public OntologyTag addTagAttribute(@Valid @RequestBody
                                                                                      @Valid AddTagRequest request)

Add a tag for a single attribute

Parameters:

request - the AddTagRequest containing the entityTypeId, attributeName, relationIRI and ontologyTermIRIs

deleteSingleTag

@PostMapping(value="/deletesingletag")
 @ResponseBody
public void deleteSingleTag(@Valid @RequestBody
                                                                                  @Valid RemoveTagRequest request)

Delete a single tag

Parameters:

request - the RemoveTagRequest containing entityTypeId, attributeName, relationIRI and ontologyTermIRI

clearAllTags

@PostMapping(value="/clearalltags")
 @ResponseBody
public void clearAllTags(@RequestParam
                                                                            String entityTypeId)

Clears all tags from every attribute in the current target entity

Parameters:

entityTypeId - The name of the Entity

autoTagAttributes

@PostMapping(value="/autotagattributes")
 @ResponseBody
public Map<String,OntologyTag> autoTagAttributes(@Valid @RequestBody
                                                                                                         @Valid AutoTagRequest request)

Automatically tags all attributes in the current entity using Lucene lexical matching. Stores the tags in the OntologyTag Repository.

Parameters:

request - containing the entityTypeId and selected ontology identifiers

Returns:

A Map containing Attribute name and a Map of Tag iri and label

getAllOntologyTerms

@PostMapping(value="/getontologyterms")
 @ResponseBody
public List<OntologyTerm> getAllOntologyTerms(@Valid @RequestBody
                                                                                                     @Valid GetOntologyTermRequest request)

Returns ontology terms based on a search term and a selected ontology

Parameters:

request - Containing ontology identifiers and a search term

Returns:

A List of OntologyTerms

handleRuntimeException

@ExceptionHandler(value=java.lang.RuntimeException.class)
 @ResponseBody
 @ResponseStatus(value=INTERNAL_SERVER_ERROR)
public ErrorMessageResponse handleRuntimeException(RuntimeException e)