Uses of Class
org.molgenis.gavin.job.input.model.LineType

Packages that use LineType

Package	Description
org.molgenis.gavin.job
org.molgenis.gavin.job.input
org.molgenis.gavin.job.input.model

Uses of LineType in org.molgenis.gavin.job

Methods in org.molgenis.gavin.job that return types with arguments of type LineType

Modifier and Type	Method and Description
com.google.common.collect.Multiset<LineType>	GavinJobExecution.getLineTypes()

Method parameters in org.molgenis.gavin.job with type arguments of type LineType

Modifier and Type	Method and Description
void	GavinJobExecution.setLineTypes(com.google.common.collect.Multiset<LineType> lineTypes)

Uses of LineType in org.molgenis.gavin.job.input

Methods in org.molgenis.gavin.job.input that return LineType

Modifier and Type	Method and Description
LineType	Parser.transformLine(String line, int numLines, int numValidLines, LineSink outputSink, LineSink errorSink) Transforms a single line.

Methods in org.molgenis.gavin.job.input that return types with arguments of type LineType

Modifier and Type	Method and Description
com.google.common.collect.Multiset<LineType>	Parser.tryTransform(File inputFile, File output, File error) Transforms gavin input file.

Uses of LineType in org.molgenis.gavin.job.input.model

Methods in org.molgenis.gavin.job.input.model that return LineType

Modifier and Type	Method and Description
LineType	Variant.getLineType()
LineType	VcfVariant.getLineType()
LineType	CaddVariant.getLineType()
static LineType	LineType.valueOf(String name) Returns the enum constant of this type with the specified name.
static LineType[]	LineType.values() Returns an array containing the constants of this enum type, in the order they are declared.