org.molgenis.data.csv

Class CsvRepository

java.lang.Object

org.molgenis.data.support.AbstractRepository

org.molgenis.data.csv.CsvRepository

All Implemented Interfaces:

Closeable, AutoCloseable, Iterable<Entity>, Repository<Entity>

public class CsvRepository
extends AbstractRepository

Repository implementation for csv files.

The filename without the extension is considered to be the entityname

Constructor Summary

Constructors

Constructor and Description
CsvRepository(File file, EntityTypeFactory entityTypeFactory, AttributeFactory attrMetaFactory, List<CellProcessor> cellProcessors)
CsvRepository(File file, EntityTypeFactory entityTypeFactory, AttributeFactory attrMetaFactory, List<CellProcessor> cellProcessors, Character separator)
CsvRepository(File file, EntityTypeFactory entityTypeFactory, AttributeFactory attrMetaFactory, String sheetName, List<CellProcessor> cellProcessors)
CsvRepository(String file, EntityTypeFactory entityTypeFactory, AttributeFactory attrMetaFactory)

Method Summary

Modifier and Type	Method and Description
void	addCellProcessor(CellProcessor cellProcessor)
long	count()
Set<RepositoryCapability>	getCapabilities()
EntityType	getEntityType()
Iterator<Entity>	iterator()

Methods inherited from class org.molgenis.data.support.AbstractRepository

add, add, aggregate, close, count, delete, delete, deleteAll, deleteAll, deleteById, findAll, findAll, findAll, findOne, findOneById, findOneById, forEachBatched, getName, getQueryOperators, query, update, update

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.molgenis.data.Repository

forEachBatched

Methods inherited from interface java.lang.Iterable

forEach, spliterator

Constructor Detail

CsvRepository

public CsvRepository(String file,
                     EntityTypeFactory entityTypeFactory,
                     AttributeFactory attrMetaFactory)

CsvRepository

public CsvRepository(File file,
                     EntityTypeFactory entityTypeFactory,
                     AttributeFactory attrMetaFactory,
                     @Nullable
                     List<CellProcessor> cellProcessors,
                     Character separator)

CsvRepository

public CsvRepository(File file,
                     EntityTypeFactory entityTypeFactory,
                     AttributeFactory attrMetaFactory,
                     @Nullable
                     List<CellProcessor> cellProcessors)

CsvRepository

public CsvRepository(File file,
                     EntityTypeFactory entityTypeFactory,
                     AttributeFactory attrMetaFactory,
                     String sheetName,
                     @Nullable
                     List<CellProcessor> cellProcessors)

Method Detail

iterator

public Iterator<Entity> iterator()

getEntityType

public EntityType getEntityType()

addCellProcessor

public void addCellProcessor(CellProcessor cellProcessor)

getCapabilities

public Set<RepositoryCapability> getCapabilities()

count

public long count()

Specified by:

count in interface Repository<Entity>

Overrides:

count in class AbstractRepository