org.molgenis.data.annotation.core.query

Class LocusQueryCreator

java.lang.Object

org.molgenis.data.annotation.core.query.LocusQueryCreator

All Implemented Interfaces:

EntityProcessor, QueryCreator

public class LocusQueryCreator
extends Object
implements QueryCreator

Creates a Locus query that finds rows that match chromosome/position

Constructor Summary

Constructors

Constructor and Description
LocusQueryCreator(VcfAttributes vcfAttributes)

Method Summary

Modifier and Type	Method and Description
Query<Entity>	createQuery(Entity entity)
static Query<Entity>	createQuery(Locus locus)
Collection<Attribute>	getRequiredAttributes()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LocusQueryCreator

public LocusQueryCreator(VcfAttributes vcfAttributes)

Method Detail

createQuery

public Query<Entity> createQuery(Entity entity)

Specified by:

createQuery in interface QueryCreator

createQuery

public static Query<Entity> createQuery(Locus locus)

getRequiredAttributes

public Collection<Attribute> getRequiredAttributes()

Specified by:

getRequiredAttributes in interface EntityProcessor

Returns:

Collection of atomic Attribute that must be present in the annotated Entity.