| Package | Description |
|---|---|
| org.molgenis.data.annotation.core.entity.impl.gavin | |
| org.molgenis.data.annotation.core.entity.impl.snpeff |
| Modifier and Type | Method and Description |
|---|---|
Judgment |
GavinAlgorithm.classifyVariant(Impact impact,
Double caddScaled,
Double exacMAF,
String gene,
GavinThresholds gavinThresholds)
Classifies a variant using the given GavinThresholds.
|
Judgment |
GavinAlgorithm.genomewideClassifyVariant(Impact impact,
Double caddScaled,
Double exacMAF,
String gene)
Classifies a variant based on genome-wide thresholds
|
| Modifier and Type | Method and Description |
|---|---|
static Impact |
Impact.valueOf(String name)
Returns the enum constant of this type with the specified name.
|
static Impact[] |
Impact.values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
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