org.molgenis.data.annotation.core

Interface EffectCreatingAnnotator

All Known Implementing Classes:

SnpEffRepositoryAnnotator

public interface EffectCreatingAnnotator

Annotator that annotates variant but instead of adding columns to the variant it creates new "effects" entities with an xref to the variant.

Method Summary

Modifier and Type	Method and Description
EntityType	getTargetEntityType(EntityType sourceEMD) Annotators that add a new repository need the source meta data to construct the new repository's meta data.

Method Detail

getTargetEntityType

EntityType getTargetEntityType(EntityType sourceEMD)

Annotators that add a new repository need the source meta data to construct the new repository's meta data.

Parameters:

sourceEMD - the meta data of the source repository

Returns:

the meta data of the new repository