org.molgenis.data.annotation.core

Class EffectBasedAnnotator

java.lang.Object

org.molgenis.data.annotation.core.AbstractRepositoryAnnotator

org.molgenis.data.annotation.core.AbstractRepositoryEntityAnnotator

org.molgenis.data.annotation.core.entity.impl.framework.RepositoryAnnotatorImpl

org.molgenis.data.annotation.core.EffectBasedAnnotator

All Implemented Interfaces:

RepositoryAnnotator

public class EffectBasedAnnotator
extends RepositoryAnnotatorImpl

Annotator that annotates the "effects" entities rather than the variants themself

Field Summary

Fields inherited from interface org.molgenis.data.annotation.core.RepositoryAnnotator

ANNOTATOR_PREFIX

Constructor Summary

Constructors

Constructor and Description
EffectBasedAnnotator(String NAME)

Method Summary

Modifier and Type	Method and Description
void	init(EntityAnnotator entityAnnotator)

Methods inherited from class org.molgenis.data.annotation.core.entity.impl.framework.RepositoryAnnotatorImpl

annotateEntity, annotationDataExists, createAnnotatorAttributes, getCmdLineAnnotatorSettingsConfigurer, getInfo, getOutputAttributes, getRequiredAttributes, getSimpleName

Methods inherited from class org.molgenis.data.annotation.core.AbstractRepositoryEntityAnnotator

annotate, annotate

Methods inherited from class org.molgenis.data.annotation.core.AbstractRepositoryAnnotator

annotate, canAnnotate, getDescription, getFullName

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

EffectBasedAnnotator

public EffectBasedAnnotator(String NAME)

Method Detail

init

public void init(EntityAnnotator entityAnnotator)

Overrides:

init in class RepositoryAnnotatorImpl