org.molgenis.data.annotation.provider

Class HgncLocationsProvider

java.lang.Object

org.molgenis.data.annotation.provider.HgncLocationsProvider

@Component
public class HgncLocationsProvider
extends Object

Field Summary

Fields

Modifier and Type	Field and Description
static String	DEFAULT_HGNC_LOCATIONS_VALUE
static String	KEY_HGNC_LOCATIONS_VALUE

Constructor Summary

Constructors

Constructor and Description
HgncLocationsProvider(MolgenisSettings molgenisSettings)

Method Summary

Modifier and Type	Method and Description
Map<String,HGNCLocations>	getHgncLocations()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

KEY_HGNC_LOCATIONS_VALUE

public static final String KEY_HGNC_LOCATIONS_VALUE

See Also:

Constant Field Values

DEFAULT_HGNC_LOCATIONS_VALUE

public static final String DEFAULT_HGNC_LOCATIONS_VALUE

See Also:

Constant Field Values

Constructor Detail

HgncLocationsProvider

@Autowired
public HgncLocationsProvider(MolgenisSettings molgenisSettings)

Method Detail

getHgncLocations

public Map<String,HGNCLocations> getHgncLocations()
                                           throws IOException

Returns:

map of GeneSymbol to HGNCLoc(GeneSymbol, Start, End, Chrom)

Throws:

IOException