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A

AbstractStaticContentController - Class in org.molgenis.ui.controller
 
AbstractStaticContentController(String, String) - Constructor for class org.molgenis.ui.controller.AbstractStaticContentController
 
AbstractWizardController - Class in org.molgenis.ui.wizard
 
AbstractWizardController(String, String) - Constructor for class org.molgenis.ui.wizard.AbstractWizardController
 
AbstractWizardPage - Class in org.molgenis.ui.wizard
Abstract wizard page.
AbstractWizardPage() - Constructor for class org.molgenis.ui.wizard.AbstractWizardPage
 
activation(UserManagerController.Activation) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController
 
ActivationResponse() - Constructor for class org.molgenis.ui.admin.usermanager.UserManagerController.ActivationResponse
 
addBootstrapTheme(MultipartFile, MultipartFile) - Method in class org.molgenis.ui.thememanager.ThemeManagerController
Add a new bootstrap theme, theme is passed as a bootstrap css file.
addFormatters(FormatterRegistry) - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
addFreemarkerVariables(Map<String, Object>) - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
addGroupEntityClassPermissions(String, WebRequest) - Method in class org.molgenis.data.importer.wizard.ImportWizardController
 
addInterceptors(InterceptorRegistry) - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
addPage(WizardPage) - Method in class org.molgenis.ui.wizard.Wizard
 
addResourceHandlers(ResourceHandlerRegistry) - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
addStyle(String, String, InputStream, String, InputStream) - Method in interface org.molgenis.ui.style.StyleService
Add a bootstrap theme
addStyle(String, String, InputStream, String, InputStream) - Method in class org.molgenis.ui.style.StyleServiceImpl
 
addUserToGroup(String, String) - Method in interface org.molgenis.ui.admin.usermanager.UserManagerService
 
addUserToGroup(String, String) - Method in class org.molgenis.ui.admin.usermanager.UserManagerServiceImpl
 
AggregateQueryRsql - Class in org.molgenis.data.rsql
Create MOLGENIS aggregation query from RSQL node.
AggregateQueryRsql(Node) - Constructor for class org.molgenis.data.rsql.AggregateQueryRsql
 
AggregateQueryRsqlVisitor - Class in org.molgenis.data.rsql
RSQLVisitor implementation for molgenis Query.
AggregateQueryRsqlVisitor(EntityType, Query<Entity>) - Constructor for class org.molgenis.data.rsql.AggregateQueryRsqlVisitor
 
AppDbSettings - Class in org.molgenis.ui.settings
Application settings that are read from a data source and persisted to a data source.
AppDbSettings() - Constructor for class org.molgenis.ui.settings.AppDbSettings
 
AppDbSettings.Meta - Class in org.molgenis.ui.settings
 
APPLICATION_JSON - Static variable in class org.molgenis.ui.converter.RDFMediaType
 
APPLICATION_JSONLD - Static variable in class org.molgenis.ui.converter.RDFMediaType
 
APPLICATION_NQUADS - Static variable in class org.molgenis.ui.converter.RDFMediaType
 
APPLICATION_RDF_XML - Static variable in class org.molgenis.ui.converter.RDFMediaType
 
APPLICATION_TRIG - Static variable in class org.molgenis.ui.converter.RDFMediaType
 
APPLICATION_TRIG_VALUE - Static variable in class org.molgenis.ui.converter.RDFMediaType
 
APPLICATION_X_TURTLE - Static variable in class org.molgenis.ui.converter.RDFMediaType
 
applicationContextProvider() - Method in class org.molgenis.ui.MolgenisWebAppConfig
Bean that allows referencing Spring managed beans from Java code which is not managed by Spring
ATTRIBUTE_ENVIRONMENT_TYPE - Static variable in class org.molgenis.ui.MolgenisInterceptor
 

B

BOOTSTRAP_3_THEME - Static variable in class org.molgenis.ui.style.StyleSheetMetadata
 
BOOTSTRAP_4_THEME - Static variable in class org.molgenis.ui.style.StyleSheetMetadata
 
BOOTSTRAP_FALL_BACK_THEME - Static variable in class org.molgenis.ui.style.StyleServiceImpl
 
BootstrapThemePopulator - Class in org.molgenis.ui.style
 
BootstrapThemePopulator(StyleService, DataService) - Constructor for class org.molgenis.ui.style.BootstrapThemePopulator
 
BootstrapVersion - Enum in org.molgenis.ui.style
 
BrowserDetectionFilter - Class in org.molgenis.ui.browserdetection
Servlet filter that forwards the request to an browser unsupported message page if the user uses an unsupported browser (< IE9)
BrowserDetectionFilter() - Constructor for class org.molgenis.ui.browserdetection.BrowserDetectionFilter
 

C

changeGroupMembership(UserManagerController.GroupMembership) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController
 
checkPermissions(String) - Method in interface org.molgenis.ui.controller.StaticContentService
 
checkPermissions(String) - Method in class org.molgenis.ui.controller.StaticContentServiceImpl
 
clientHttpRequestFactory() - Method in class org.molgenis.data.config.HttpClientConfig
 
closeTemplateSource(Object) - Method in class org.molgenis.ui.freemarker.RepositoryTemplateLoader
 
concatAttributeHref(String, String, Object, String) - Static method in class org.molgenis.data.support.Href
Create an encoded href for an attribute
concatEntityCollectionHref(String, String, String, List<String>) - Static method in class org.molgenis.data.support.Href
Create an encoded href for an entity collection
concatEntityHref(Entity) - Static method in class org.molgenis.data.support.Href
 
concatEntityHref(String, String, Object) - Static method in class org.molgenis.data.support.Href
Create an encoded href for an entity
concatMetaAttributeHref(String, String, String) - Static method in class org.molgenis.data.support.Href
Create an encoded href for an attribute meta
concatMetaEntityHref(String, String) - Static method in class org.molgenis.data.support.Href
Create an encoded href for an entity meta
concatMetaEntityHrefV2(String, String) - Static method in class org.molgenis.data.support.Href
 
configureContentNegotiation(ContentNegotiationConfigurer) - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
configureMessageConverters(List<HttpMessageConverter<?>>) - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
configurePathMatch(PathMatchConfigurer) - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
containsItem(String) - Method in class org.molgenis.ui.menu.MenuItemToMolgenisUiMenuAdapter
 
containsItem(String) - Method in class org.molgenis.ui.security.MolgenisUiMenuPermissionDecorator
 
containsItem(String) - Method in class org.molgenis.ui.XmlMolgenisUiMenu
Deprecated.
 
CONTENT - Static variable in class org.molgenis.ui.settings.StaticContentMeta
 
corsInterceptor() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
create(String, String, String, UiMenuItemType, List<MenuItem>) - Static method in class org.molgenis.ui.menu.json.MenuItem
 
create(UiMenuItem) - Static method in class org.molgenis.ui.menu.json.MenuItem
 
createAggregateQuery(EntityType, Query<Entity>) - Method in class org.molgenis.data.rsql.AggregateQueryRsql
 
createDecoratedRepository(Repository<StyleSheet>) - Method in class org.molgenis.ui.style.StyleSheetRepositoryDecoratorFactory
 
createJobExecutionViewHref(JobExecution, int) - Method in class org.molgenis.ui.jobs.JobsController
 
createLocal(String) - Static method in class org.molgenis.ui.style.Style
Create new style.
createMenuType() - Method in class org.molgenis.ui.ObjectFactory
Create an instance of MenuType
createMolgenis() - Method in class org.molgenis.ui.ObjectFactory
Create an instance of Molgenis
createPluginType() - Method in class org.molgenis.ui.ObjectFactory
Create an instance of PluginType
createQuery(String, EntityType) - Method in class org.molgenis.data.rsql.MolgenisRSQL
 
createQuery(EntityType) - Method in class org.molgenis.data.rsql.QueryRsql
 
createWizard() - Method in class org.molgenis.data.importer.wizard.ImportWizardController
 
createWizard() - Method in class org.molgenis.ui.wizard.AbstractWizardController
 
CsvHttpMessageConverter - Class in org.molgenis.messageconverter
Converts an EntityCollection to comma separated values
CsvHttpMessageConverter() - Constructor for class org.molgenis.messageconverter.CsvHttpMessageConverter
 

D

dataexplorerMessageSource() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
delete(StyleSheet) - Method in class org.molgenis.ui.style.StyleSheetRepositoryDecorator
 
delete(Stream<StyleSheet>) - Method in class org.molgenis.ui.style.StyleSheetRepositoryDecorator
 
deleteAll() - Method in class org.molgenis.ui.style.StyleSheetRepositoryDecorator
 
deleteAll(Stream<Object>) - Method in class org.molgenis.ui.style.StyleSheetRepositoryDecorator
 
deleteById(Object) - Method in class org.molgenis.ui.style.StyleSheetRepositoryDecorator
 
deleteMenuItem(String) - Method in class org.molgenis.ui.menu.Menu
 
deleteMenuItem(String, List<MenuItem>) - Static method in class org.molgenis.ui.menu.MenuUtils
 
description - Variable in class org.molgenis.ui.Molgenis
 
destroy() - Method in class org.molgenis.ui.browserdetection.BrowserDetectionFilter
 
disableTwoFactorAuthentication(Model) - Method in class org.molgenis.ui.admin.user.UserAccountController
 
doFilter(ServletRequest, ServletResponse, FilterChain) - Method in class org.molgenis.ui.browserdetection.BrowserDetectionFilter
 

E

enableTwoFactorAuthentication() - Method in class org.molgenis.ui.admin.user.UserAccountController
 
EntitySerializer - Class in org.molgenis.util
Serializer for concrete Entity subclasses.
EntitySerializer() - Constructor for class org.molgenis.util.EntitySerializer
 
equals(Object) - Method in class org.molgenis.ui.admin.usermanager.UserViewData
 
equals(Object) - Method in class org.molgenis.ui.freemarker.RepositoryTemplateLoader.TemplateSource
 
equals(Object) - Method in class org.molgenis.ui.menu.MenuItem
 
exec(List) - Method in class org.molgenis.ui.freemarker.LimitMethod
 

F

FeedbackController - Class in org.molgenis.ui.controller
Controller that handles feedback page requests.
FeedbackController(UserService, AppSettings, CaptchaService, MailSender) - Constructor for class org.molgenis.ui.controller.FeedbackController
 
FeedbackController.FeedbackForm - Class in org.molgenis.ui.controller
Bean for the feedback form data.
FeedbackForm() - Constructor for class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
FILE_STORE_PLUGIN_APPS_PATH - Static variable in class org.molgenis.ui.FileStoreConstants
 
FileDownloadController - Class in org.molgenis.file
 
FileDownloadController(FileStore, DataService) - Constructor for class org.molgenis.file.FileDownloadController
 
fileStore() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
FileStoreConstants - Class in org.molgenis.ui
 
findLastJobs() - Method in class org.molgenis.ui.jobs.JobsController
 
findMenuItem(String) - Method in class org.molgenis.ui.menu.Menu
 
findMenuItem(String, List<MenuItem>) - Static method in class org.molgenis.ui.menu.MenuUtils
 
findMenuItemPath(String) - Method in class org.molgenis.ui.menu.Menu
 
findMenuItemPath(String, Menu) - Static method in class org.molgenis.ui.menu.MenuUtils
Return URI path to menu item of the given id or null if item does not exist.
findTemplateSource(String) - Method in class org.molgenis.ui.freemarker.RepositoryTemplateLoader
 
findThemeByName(String) - Method in interface org.molgenis.ui.style.StyleService
Find the styleSheet for a given theme name
findThemeByName(String) - Method in class org.molgenis.ui.style.StyleServiceImpl
 
formMessageSource() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
forwardDefaultMenuDefaultPlugin(Model) - Method in class org.molgenis.ui.MolgenisMenuController
 
forwardMenuDefaultPlugin(String, Model) - Method in class org.molgenis.ui.MolgenisMenuController
 
forwardMenuPlugin(HttpServletRequest, String, String, Model) - Method in class org.molgenis.ui.MolgenisMenuController
 
FREEMARKER_TEMPLATE - Static variable in class org.molgenis.data.system.core.FreemarkerTemplateMetaData
 
freeMarkerConfigurer() - Method in class org.molgenis.ui.MolgenisWebAppConfig
Configure freemarker.
FreemarkerTemplate - Class in org.molgenis.data.system.core
 
FreemarkerTemplate(Entity) - Constructor for class org.molgenis.data.system.core.FreemarkerTemplate
 
FreemarkerTemplate(EntityType) - Constructor for class org.molgenis.data.system.core.FreemarkerTemplate
 
FreemarkerTemplate(String, EntityType) - Constructor for class org.molgenis.data.system.core.FreemarkerTemplate
 
FreemarkerTemplateFactory - Class in org.molgenis.data.system.core
 
FreemarkerTemplateMetaData - Class in org.molgenis.data.system.core
 

G

generateRecoveryCodes() - Method in class org.molgenis.ui.admin.user.UserAccountController
 
getActive() - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.Activation
 
getActiveItem() - Method in class org.molgenis.ui.menu.MenuItemToMolgenisUiMenuAdapter
 
getActiveItem() - Method in class org.molgenis.ui.security.MolgenisUiMenuPermissionDecorator
 
getActiveItem() - Method in class org.molgenis.ui.XmlMolgenisUiMenu
Deprecated.
 
getAggregateThreshold() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getAllGroups() - Method in interface org.molgenis.ui.admin.usermanager.UserManagerService
 
getAllGroups() - Method in class org.molgenis.ui.admin.usermanager.UserManagerServiceImpl
 
getAllowPermissions() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getAllUsers() - Method in interface org.molgenis.ui.admin.usermanager.UserManagerService
 
getAllUsers() - Method in class org.molgenis.ui.admin.usermanager.UserManagerServiceImpl
 
getAvailableStyles() - Method in interface org.molgenis.ui.style.StyleService
Fetches the available styleSheet from the data store and stores them in a list
getAvailableStyles() - Method in class org.molgenis.ui.style.StyleServiceImpl
 
getBaseUrl(String) - Method in class org.molgenis.ui.controller.VuePluginController
 
getBootstrap3Theme() - Method in class org.molgenis.ui.style.StyleSheet
 
getBootstrap4Theme() - Method in class org.molgenis.ui.style.StyleSheet
 
getBootstrapTheme() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getBreadcrumb() - Method in class org.molgenis.ui.menu.MenuItemToMolgenisUiMenuAdapter
 
getBreadcrumb() - Method in class org.molgenis.ui.security.MolgenisUiMenuPermissionDecorator
 
getBreadcrumb() - Method in class org.molgenis.ui.XmlMolgenisUiMenu
Deprecated.
 
getContent(String) - Method in interface org.molgenis.ui.controller.StaticContentService
Get static page content
getContent(String) - Method in class org.molgenis.ui.controller.StaticContentServiceImpl
 
getContent() - Method in class org.molgenis.ui.settings.StaticContent
 
getCssHref() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getCurrentPage() - Method in class org.molgenis.ui.wizard.Wizard
 
getCurrentUri() - Static method in class org.molgenis.ui.MolgenisUiUtils
Gets the uri which is currently visible in the browser.
getCustomJavascript() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getDefaultEntity() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getDefaultMenuValue() - Method in class org.molgenis.ui.menumanager.MenuManagerServiceImpl
 
getDescription() - Method in class org.molgenis.ui.Molgenis
Gets the value of the description property.
getEmail() - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
getEntitiesImportable() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getEntitiesInDefaultPackage() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getEntityImportOption() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getErrorMessage() - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
getFeedback() - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
getFieldsAvailable() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getFieldsDetected() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getFieldsRequired() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getFieldsUnknown() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getFile() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getFile(String, HttpServletResponse) - Method in class org.molgenis.file.FileDownloadController
 
getFingerprint(String) - Method in class org.molgenis.ui.style.ThemeFingerprintRegistry
 
getFooter() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getFreemarkerTemplateName() - Method in class org.molgenis.ui.wizard.AbstractWizardPage
Name of the freemarker template (including the ftl) that holds the piece of html for this wizard page that is pasted into the wizard html template
getFreemarkerTemplateName() - Method in interface org.molgenis.ui.wizard.WizardPage
Name of the freemarker template (including the ftl) that holds the piece of html for this wizard page that is pasted into the wizard html template
getFrom() - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
getFullName() - Method in class org.molgenis.ui.admin.usermanager.UserViewData
 
getGoogleAnalyticsAccountPrivacyFriendly() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getGoogleAnalyticsAccountPrivacyFriendlyMolgenis() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getGoogleAnalyticsIpAnonymization() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getGoogleAnalyticsTrackingId() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getGoogleAnalyticsTrackingIdMolgenis() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getGroupEntityClassPermissions(String, WebRequest) - Method in class org.molgenis.data.importer.wizard.ImportWizardController
 
getGroupEntityClassPermissions(String) - Method in class org.molgenis.ui.admin.permission.PermissionManagerController
 
getGroupId() - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.GroupMembership
 
getGroupPluginPermissions(String) - Method in class org.molgenis.ui.admin.permission.PermissionManagerController
 
getGroups() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getGroupsWhereUserIsMember(String) - Method in interface org.molgenis.ui.admin.usermanager.UserManagerService
 
getGroupsWhereUserIsMember(String) - Method in class org.molgenis.ui.admin.usermanager.UserManagerServiceImpl
 
getGroupsWhereUserIsNotMember(String) - Method in interface org.molgenis.ui.admin.usermanager.UserManagerService
 
getGroupsWhereUserIsNotMember(String) - Method in class org.molgenis.ui.admin.usermanager.UserManagerServiceImpl
 
getHref() - Method in class org.molgenis.data.support.Href
 
getHrefCollection() - Method in class org.molgenis.data.support.Href
 
getId() - Method in class org.molgenis.data.system.core.FreemarkerTemplate
 
getId() - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.Activation
 
getId() - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.ActivationResponse
 
getId() - Method in class org.molgenis.ui.admin.usermanager.UserViewData
 
getId() - Method in class org.molgenis.ui.menu.MenuItem
 
getId() - Method in class org.molgenis.ui.menu.MenuItemToMolgenisUiMenuItemAdapter
 
getId() - Method in class org.molgenis.ui.PluginType
Gets the value of the id property.
getId() - Method in class org.molgenis.ui.security.MolgenisUiMenuPermissionDecorator
 
getId() - Method in class org.molgenis.ui.style.StyleSheet
 
getId() - Method in class org.molgenis.ui.wizard.WizardButton
 
getId() - Method in class org.molgenis.ui.XmlMolgenisUiMenu
Deprecated.
 
getId() - Method in class org.molgenis.ui.XmlMolgenisUiPlugin
Deprecated.
 
getImportedEntities() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getImportResult() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getImportRunId() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getIndexedEntities() - Method in interface org.molgenis.data.index.admin.IndexManagerService
Returns all indexed entity meta data sorted by entity label
getIndexedEntities() - Method in class org.molgenis.data.index.admin.IndexManagerServiceImpl
 
getItems() - Method in class org.molgenis.ui.menu.MenuItem
 
getItems() - Method in class org.molgenis.ui.menu.MenuItemToMolgenisUiMenuAdapter
 
getItems() - Method in class org.molgenis.ui.security.MolgenisUiMenuPermissionDecorator
 
getItems() - Method in class org.molgenis.ui.XmlMolgenisUiMenu
Deprecated.
 
getJavascripts() - Method in class org.molgenis.ui.wizard.AbstractWizardController
 
getKey() - Method in class org.molgenis.ui.settings.StaticContent
 
getLabel() - Method in class org.molgenis.ui.menu.MenuItem
 
getLabel() - Method in class org.molgenis.ui.MenuType
Gets the value of the label property.
getLabel() - Method in class org.molgenis.ui.Molgenis
Gets the value of the label property.
getLanguageCode() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getLastModified(Object) - Method in class org.molgenis.ui.freemarker.RepositoryTemplateLoader
The repository does not offer a way to check last modified date.
getLocation() - Method in class org.molgenis.ui.style.Style
 
getLogo(OutputStream, String, String, HttpServletResponse) - Method in class org.molgenis.ui.LogoController
Get a file from the logo subdirectory of the filestore
getLogoNavBarHref() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getLogoTopHref() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getMember() - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.GroupMembership
 
getMenu() - Method in class org.molgenis.ui.menu.MenuMolgenisUi
 
getMenu(String) - Method in class org.molgenis.ui.menu.MenuMolgenisUi
 
getMenu() - Method in interface org.molgenis.ui.menu.MenuReaderService
 
getMenu() - Method in class org.molgenis.ui.menu.MenuReaderServiceImpl
 
getMenu() - Method in class org.molgenis.ui.menumanager.MenuManagerServiceImpl
 
getMenu() - Method in class org.molgenis.ui.Molgenis
Gets the value of the menu property.
getMenu() - Method in class org.molgenis.ui.security.MolgenisUiPermissionDecorator
 
getMenu(String) - Method in class org.molgenis.ui.security.MolgenisUiPermissionDecorator
 
getMenu() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getMenu() - Method in class org.molgenis.ui.XmlMolgenisUi
Deprecated.
 
getMenu(String) - Method in class org.molgenis.ui.XmlMolgenisUi
Deprecated.
 
getMenuJson() - Method in class org.molgenis.ui.menu.MenuMolgenisUi
 
getMenuJson(UiMenu) - Static method in class org.molgenis.ui.menu.MenuUtils
 
getMenuJson() - Method in class org.molgenis.ui.security.MolgenisUiPermissionDecorator
 
getMenuJson() - Method in class org.molgenis.ui.XmlMolgenisUi
Deprecated.
 
getMenuOrPlugin() - Method in class org.molgenis.ui.MenuType
Gets the value of the menuOrPlugin property.
getMenuOrPlugin() - Method in class org.molgenis.ui.PluginType
Gets the value of the menuOrPlugin property.
getMustChangeEntityName() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getName() - Method in class org.molgenis.data.system.core.FreemarkerTemplate
 
getName() - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
getName() - Method in class org.molgenis.ui.menu.MenuItemToMolgenisUiMenuItemAdapter
 
getName() - Method in class org.molgenis.ui.MenuType
Gets the value of the name property.
getName() - Method in class org.molgenis.ui.Molgenis
Gets the value of the name property.
getName() - Method in class org.molgenis.ui.PluginType
Gets the value of the name property.
getName() - Method in class org.molgenis.ui.security.MolgenisUiMenuPermissionDecorator
 
getName() - Method in class org.molgenis.ui.style.Style
 
getName() - Method in class org.molgenis.ui.style.StyleSheet
 
getName() - Method in class org.molgenis.ui.XmlMolgenisUiMenu
Deprecated.
 
getName() - Method in class org.molgenis.ui.XmlMolgenisUiPlugin
Deprecated.
 
getNameWithoutExtension() - Method in class org.molgenis.data.system.core.FreemarkerTemplate
 
getNextButton() - Method in class org.molgenis.ui.wizard.Wizard
 
getPackages() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getPages() - Method in class org.molgenis.ui.wizard.Wizard
 
getParams() - Method in class org.molgenis.ui.menu.MenuItem
 
getParentMenu() - Method in class org.molgenis.ui.menu.MenuItemToMolgenisUiMenuItemAdapter
 
getParentMenu() - Method in class org.molgenis.ui.security.MolgenisUiMenuPermissionDecorator
 
getParentMenu() - Method in class org.molgenis.ui.XmlMolgenisUiMenu
Deprecated.
 
getParentMenu() - Method in class org.molgenis.ui.XmlMolgenisUiPlugin
Deprecated.
 
getPlugins() - Method in interface org.molgenis.ui.menumanager.MenuManagerService
 
getPlugins() - Method in class org.molgenis.ui.menumanager.MenuManagerServiceImpl
 
getPreviousButton() - Method in class org.molgenis.ui.wizard.Wizard
 
getReader(Object, String) - Method in class org.molgenis.ui.freemarker.RepositoryTemplateLoader
 
getRecoveryCodes() - Method in class org.molgenis.ui.admin.user.UserAccountController
 
getSelectedStyle() - Method in interface org.molgenis.ui.style.StyleService
Get the style that is currently selected
getSelectedStyle() - Method in class org.molgenis.ui.style.StyleServiceImpl
 
getStyle(String) - Method in interface org.molgenis.ui.style.StyleService
Returns a style that matches the name of the given input
getStyle(String) - Method in class org.molgenis.ui.style.StyleServiceImpl
 
getStylesheets() - Method in class org.molgenis.ui.wizard.AbstractWizardController
 
getSubject() - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
getSupportedDatabaseActions() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getTargetUri() - Method in class org.molgenis.ui.wizard.WizardButton
 
getThemeCss(String, String, HttpServletResponse) - Method in class org.molgenis.ui.style.StyleController
 
getThemeData(String, BootstrapVersion) - Method in interface org.molgenis.ui.style.StyleService
Get the styleSheet data for a given theme and bootstrap version ( 3 or 4 )
getThemeData(String, BootstrapVersion) - Method in class org.molgenis.ui.style.StyleServiceImpl
 
getTitle() - Method in class org.molgenis.data.importer.wizard.ImportResultsWizardPage
 
getTitle() - Method in class org.molgenis.data.importer.wizard.OptionsWizardPage
 
getTitle() - Method in class org.molgenis.data.importer.wizard.PackageWizardPage
 
getTitle() - Method in class org.molgenis.data.importer.wizard.UploadWizardPage
 
getTitle() - Method in class org.molgenis.data.importer.wizard.ValidationResultWizardPage
 
getTitle() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getTitle() - Method in class org.molgenis.ui.wizard.AbstractWizardPage
 
getTitle() - Method in class org.molgenis.ui.wizard.WizardButton
 
getTitle() - Method in interface org.molgenis.ui.wizard.WizardPage
 
getTrackingCodeFooter() - Method in class org.molgenis.ui.settings.AppDbSettings
 
getType() - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.Activation
 
getType() - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.ActivationResponse
 
getType() - Method in class org.molgenis.ui.menu.MenuItem
 
getType() - Method in class org.molgenis.ui.menu.MenuItemToMolgenisUiMenuItemAdapter
 
getType() - Method in class org.molgenis.ui.security.MolgenisUiMenuPermissionDecorator
 
getType() - Method in class org.molgenis.ui.XmlMolgenisUiMenu
Deprecated.
 
getType() - Method in class org.molgenis.ui.XmlMolgenisUiPlugin
Deprecated.
 
getUrl() - Method in class org.molgenis.ui.menu.MenuItemToMolgenisUiMenuItemAdapter
 
getUrl() - Method in class org.molgenis.ui.PluginType
Gets the value of the url property.
getUrl() - Method in class org.molgenis.ui.security.MolgenisUiMenuPermissionDecorator
 
getUrl() - Method in class org.molgenis.ui.XmlMolgenisUiMenu
Deprecated.
 
getUrl() - Method in class org.molgenis.ui.XmlMolgenisUiPlugin
Deprecated.
 
getUserEntityClassPermissions(String) - Method in class org.molgenis.ui.admin.permission.PermissionManagerController
 
getUserId() - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.GroupMembership
 
getUserId() - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.GroupMembershipResponse
 
getUsername() - Method in class org.molgenis.ui.admin.usermanager.UserViewData
 
getUserPluginPermissions(String) - Method in class org.molgenis.ui.admin.permission.PermissionManagerController
 
getUsersMemberInGroup(String) - Method in interface org.molgenis.ui.admin.usermanager.UserManagerService
 
getUsersMemberInGroup(String) - Method in class org.molgenis.ui.admin.usermanager.UserManagerServiceImpl
 
getValidationMessage() - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
getValue() - Method in class org.molgenis.data.system.core.FreemarkerTemplate
 
GroupMembership() - Constructor for class org.molgenis.ui.admin.usermanager.UserManagerController.GroupMembership
 
GroupMembershipResponse() - Constructor for class org.molgenis.ui.admin.usermanager.UserManagerController.GroupMembershipResponse
 
GsonConfig - Class in org.molgenis.util
 
GsonConfig() - Constructor for class org.molgenis.util.GsonConfig
 
gsonFactoryBean() - Method in class org.molgenis.util.GsonConfig
 
gsonHttpMessageConverter() - Method in class org.molgenis.util.GsonConfig
 

H

handleException(Exception, ImportWizard, BindingResult, Logger, String) - Static method in class org.molgenis.data.importer.wizard.ImportWizardUtil
 
handleRequest(HttpServletRequest, BindingResult, Wizard) - Method in class org.molgenis.data.importer.wizard.ImportResultsWizardPage
 
handleRequest(HttpServletRequest, BindingResult, Wizard) - Method in class org.molgenis.data.importer.wizard.OptionsWizardPage
 
handleRequest(HttpServletRequest, BindingResult, Wizard) - Method in class org.molgenis.data.importer.wizard.PackageWizardPage
 
handleRequest(HttpServletRequest, BindingResult, Wizard) - Method in class org.molgenis.data.importer.wizard.UploadWizardPage
 
handleRequest(HttpServletRequest, BindingResult, Wizard) - Method in class org.molgenis.data.importer.wizard.ValidationResultWizardPage
 
handleRequest(HttpServletRequest, BindingResult, Wizard) - Method in class org.molgenis.ui.wizard.AbstractWizardPage
Handles this wizard pages business logic.
handleRequest(HttpServletRequest, BindingResult, Wizard) - Method in interface org.molgenis.ui.wizard.WizardPage
Handles this wizard pages business logic.
handleRuntimeException(RuntimeException) - Method in class org.molgenis.ui.admin.permission.PermissionManagerController
 
handleStyleException(Exception) - Method in class org.molgenis.ui.style.StyleController
 
handleStyleException(Exception) - Method in class org.molgenis.ui.thememanager.ThemeManagerController
 
handleUnknownType(Object) - Method in class org.molgenis.ui.freemarker.MolgenisFreemarkerObjectWrapper
 
hasEmail() - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
hashCode() - Method in class org.molgenis.ui.admin.usermanager.UserViewData
 
hashCode() - Method in class org.molgenis.ui.freemarker.RepositoryTemplateLoader.TemplateSource
 
hashCode() - Method in class org.molgenis.ui.menu.MenuItem
 
hasName() - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
Href - Class in org.molgenis.data.support
 
Href(String, String) - Constructor for class org.molgenis.data.support.Href
 
httpClient() - Method in class org.molgenis.data.config.HttpClientConfig
 
HttpClientConfig - Class in org.molgenis.data.config
 
HttpClientConfig() - Constructor for class org.molgenis.data.config.HttpClientConfig
 

I

ID - Static variable in class org.molgenis.data.importer.wizard.ImportWizardController
 
ID - Static variable in class org.molgenis.data.index.admin.IndexManagerController
 
ID - Static variable in class org.molgenis.data.system.core.FreemarkerTemplateMetaData
 
ID - Static variable in class org.molgenis.ui.admin.log.LogManagerController
 
ID - Static variable in class org.molgenis.ui.admin.user.UserAccountController
 
ID - Static variable in class org.molgenis.ui.controller.FeedbackController
 
ID - Static variable in class org.molgenis.ui.controller.RedirectController
 
ID - Static variable in class org.molgenis.ui.jobs.JobsController
 
ID - Static variable in class org.molgenis.ui.jobs.ScheduledJobsController
 
ID - Static variable in class org.molgenis.ui.menumanager.MenuManagerController
 
ID - Static variable in class org.molgenis.ui.MolgenisMenuController.VoidPluginController
 
id - Variable in class org.molgenis.ui.PluginType
 
ID - Static variable in class org.molgenis.ui.settingsmanager.SettingsManagerController
 
ID - Static variable in class org.molgenis.ui.style.StyleSheetMetadata
 
ID - Static variable in class org.molgenis.ui.thememanager.ThemeManagerController
 
importFile(HttpServletRequest, MultipartFile, String, String, String, Boolean) - Method in class org.molgenis.data.importer.wizard.ImportWizardController
Imports entities present in the submitted file
importFileByUrl(HttpServletRequest, String, String, String, String, Boolean) - Method in class org.molgenis.data.importer.wizard.ImportWizardController
Imports entities present in the submitted file
ImportResultsWizardPage - Class in org.molgenis.data.importer.wizard
 
ImportResultsWizardPage() - Constructor for class org.molgenis.data.importer.wizard.ImportResultsWizardPage
 
ImportWizard - Class in org.molgenis.data.importer.wizard
 
ImportWizard() - Constructor for class org.molgenis.data.importer.wizard.ImportWizard
 
ImportWizardController - Class in org.molgenis.data.importer.wizard
 
ImportWizardController(UploadWizardPage, OptionsWizardPage, PackageWizardPage, ValidationResultWizardPage, ImportResultsWizardPage, DataService, GrantedAuthoritiesMapper, UserAccountService, ImportServiceFactory, FileStore, FileRepositoryCollectionFactory, ImportRunService, GroupAuthorityFactory) - Constructor for class org.molgenis.data.importer.wizard.ImportWizardController
 
ImportWizardController(UploadWizardPage, OptionsWizardPage, PackageWizardPage, ValidationResultWizardPage, ImportResultsWizardPage, DataService, GrantedAuthoritiesMapper, UserAccountService, ImportServiceFactory, FileStore, FileRepositoryCollectionFactory, ImportRunService, ExecutorService, GroupAuthorityFactory) - Constructor for class org.molgenis.data.importer.wizard.ImportWizardController
 
ImportWizardUtil - Class in org.molgenis.data.importer.wizard
 
ImportWizardUtil() - Constructor for class org.molgenis.data.importer.wizard.ImportWizardUtil
 
index() - Method in class org.molgenis.ui.MolgenisRootController
 
IndexManagerController - Class in org.molgenis.data.index.admin
Index manager plugin
IndexManagerController() - Constructor for class org.molgenis.data.index.admin.IndexManagerController
 
IndexManagerService - Interface in org.molgenis.data.index.admin
 
IndexManagerServiceImpl - Class in org.molgenis.data.index.admin
Elasticsearch index manager service that handles authorization
IndexManagerServiceImpl(DataService, IndexService) - Constructor for class org.molgenis.data.index.admin.IndexManagerServiceImpl
 
init(Model) - Method in class org.molgenis.data.index.admin.IndexManagerController
 
init() - Method in class org.molgenis.data.system.core.FreemarkerTemplateMetaData
 
init(Model) - Method in class org.molgenis.ui.admin.log.LogManagerController
 
init(Model) - Method in class org.molgenis.ui.admin.permission.PermissionManagerController
 
init(Model) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController
 
init(FilterConfig) - Method in class org.molgenis.ui.browserdetection.BrowserDetectionFilter
 
init(Model) - Method in class org.molgenis.ui.controller.AbstractStaticContentController
 
init(Model) - Method in class org.molgenis.ui.controller.FeedbackController
Serves feedback form.
init(Model, String) - Method in class org.molgenis.ui.controller.VuePluginController
 
init(Model) - Method in class org.molgenis.ui.jobs.JobsController
 
init() - Method in class org.molgenis.ui.jobs.ScheduledJobsController
 
init(Model) - Method in class org.molgenis.ui.menumanager.MenuManagerController
 
init() - Method in class org.molgenis.ui.MolgenisMenuController.VoidPluginController
 
init() - Method in class org.molgenis.ui.settings.AppDbSettings.Meta
 
init() - Method in class org.molgenis.ui.settings.StaticContentMeta
 
init() - Method in class org.molgenis.ui.settingsmanager.SettingsManagerController
 
init() - Method in class org.molgenis.ui.style.StyleSheetMetadata
 
init(Model) - Method in class org.molgenis.ui.thememanager.ThemeManagerController
 
init(HttpServletRequest) - Method in class org.molgenis.ui.wizard.AbstractWizardController
 
initEditView(Model) - Method in class org.molgenis.ui.controller.AbstractStaticContentController
 
isActive() - Method in class org.molgenis.ui.admin.usermanager.UserViewData
 
isAuthorized() - Method in class org.molgenis.ui.menu.MenuItemToMolgenisUiMenuItemAdapter
 
isAuthorized() - Method in class org.molgenis.ui.security.MolgenisUiMenuPermissionDecorator
 
isAuthorized() - Method in class org.molgenis.ui.XmlMolgenisUiMenu
Deprecated.
 
isAuthorized() - Method in class org.molgenis.ui.XmlMolgenisUiPlugin
Deprecated.
 
isCurrentUserCanEdit(String) - Method in interface org.molgenis.ui.controller.StaticContentService
 
isCurrentUserCanEdit(String) - Method in class org.molgenis.ui.controller.StaticContentServiceImpl
 
isEnabled() - Method in class org.molgenis.ui.wizard.WizardButton
 
isFirstPage() - Method in class org.molgenis.ui.wizard.Wizard
 
isGroupMember(String) - Method in class org.molgenis.ui.admin.usermanager.UserViewData
 
isLastPage() - Method in class org.molgenis.ui.wizard.Wizard
 
isRDFMediaType(MediaType) - Static method in class org.molgenis.ui.converter.RDFMediaType
 
isRemote() - Method in class org.molgenis.ui.style.Style
 
isSubmitted() - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
isSuccess() - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.ActivationResponse
 
isSuccess() - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.GroupMembershipResponse
 
isSuperuser() - Method in class org.molgenis.ui.admin.usermanager.UserViewData
 
isSupported(String) - Method in class org.molgenis.ui.browserdetection.BrowserDetectionFilter
 
iterator() - Method in class org.molgenis.ui.menu.Menu
 

J

JobsController - Class in org.molgenis.ui.jobs
 
JobsController(UserAccountService, DataService, JobExecutionMetaData, JobScheduler, MenuReaderService) - Constructor for class org.molgenis.ui.jobs.JobsController
 

K

KEY - Static variable in class org.molgenis.ui.settings.StaticContentMeta
 

L

label - Variable in class org.molgenis.ui.MenuType
 
label - Variable in class org.molgenis.ui.Molgenis
 
LimitMethod - Class in org.molgenis.ui.freemarker
FreeMarker limit method.
LimitMethod() - Constructor for class org.molgenis.ui.freemarker.LimitMethod
 
load() - Method in class org.molgenis.ui.XmlMolgenisUiLoader
 
LogManagerController - Class in org.molgenis.ui.admin.log
 
LogManagerController() - Constructor for class org.molgenis.ui.admin.log.LogManagerController
 
LogoController - Class in org.molgenis.ui
 
LogoController(FileStore) - Constructor for class org.molgenis.ui.LogoController
 

M

mappedCorsInterceptor() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
Menu - Class in org.molgenis.ui.menu
 
Menu() - Constructor for class org.molgenis.ui.menu.Menu
 
menu - Variable in class org.molgenis.ui.Molgenis
 
MENU - Static variable in class org.molgenis.ui.settings.AppDbSettings.Meta
 
MenuItem - Class in org.molgenis.ui.menu.json
 
MenuItem() - Constructor for class org.molgenis.ui.menu.json.MenuItem
 
MenuItem - Class in org.molgenis.ui.menu
 
MenuItem() - Constructor for class org.molgenis.ui.menu.MenuItem
 
MenuItem(MenuItemType, String, String) - Constructor for class org.molgenis.ui.menu.MenuItem
 
MenuItemToMolgenisUiMenuAdapter - Class in org.molgenis.ui.menu
 
MenuItemToMolgenisUiMenuAdapter(MenuItem, MenuItem) - Constructor for class org.molgenis.ui.menu.MenuItemToMolgenisUiMenuAdapter
 
MenuItemToMolgenisUiMenuItemAdapter - Class in org.molgenis.ui.menu
 
MenuItemToMolgenisUiMenuItemAdapter(MenuItem) - Constructor for class org.molgenis.ui.menu.MenuItemToMolgenisUiMenuItemAdapter
 
MenuItemType - Enum in org.molgenis.ui.menu
 
MenuManagerController - Class in org.molgenis.ui.menumanager
Plugin to view and modify the app UI menu
MenuManagerController(MenuManagerService, FileStore, Ui, AppSettings) - Constructor for class org.molgenis.ui.menumanager.MenuManagerController
 
MenuManagerService - Interface in org.molgenis.ui.menumanager
 
menuManagerService() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
MenuManagerServiceImpl - Class in org.molgenis.ui.menumanager
 
MenuManagerServiceImpl(MenuReaderService, AppSettings, DataService) - Constructor for class org.molgenis.ui.menumanager.MenuManagerServiceImpl
 
MenuMolgenisUi - Class in org.molgenis.ui.menu
 
MenuMolgenisUi(MenuReaderService) - Constructor for class org.molgenis.ui.menu.MenuMolgenisUi
 
menuOrPlugin - Variable in class org.molgenis.ui.MenuType
 
menuOrPlugin - Variable in class org.molgenis.ui.PluginType
 
menuReaderService - Variable in class org.molgenis.ui.controller.VuePluginController
 
MenuReaderService - Interface in org.molgenis.ui.menu
 
menuReaderService() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
MenuReaderServiceImpl - Class in org.molgenis.ui.menu
 
MenuReaderServiceImpl(AppSettings) - Constructor for class org.molgenis.ui.menu.MenuReaderServiceImpl
 
MenuType - Class in org.molgenis.ui
Java class for menuType complex type.
MenuType() - Constructor for class org.molgenis.ui.MenuType
 
MenuUtils - Class in org.molgenis.ui.menu
 
MenuUtils() - Constructor for class org.molgenis.ui.menu.MenuUtils
 
Meta(MenuManagerServiceImpl) - Constructor for class org.molgenis.ui.settings.AppDbSettings.Meta
 
Molgenis - Class in org.molgenis.ui
Java class for anonymous complex type.
Molgenis() - Constructor for class org.molgenis.ui.Molgenis
 
MolgenisAccessDecisionVoter - Class in org.molgenis.ui.security
 
MolgenisAccessDecisionVoter() - Constructor for class org.molgenis.ui.security.MolgenisAccessDecisionVoter
 
MolgenisFreemarkerObjectWrapper - Class in org.molgenis.ui.freemarker
 
MolgenisFreemarkerObjectWrapper(Version) - Constructor for class org.molgenis.ui.freemarker.MolgenisFreemarkerObjectWrapper
 
MolgenisInterceptor - Class in org.molgenis.ui
Interceptor that adds default model objects to all requests that return a view.
MolgenisInterceptor(ResourceFingerprintRegistry, ThemeFingerprintRegistry, AppSettings, AuthenticationSettings, LanguageService, String) - Constructor for class org.molgenis.ui.MolgenisInterceptor
 
molgenisInterceptor() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
MolgenisMenuController - Class in org.molgenis.ui
 
MolgenisMenuController(Ui, String, String) - Constructor for class org.molgenis.ui.MolgenisMenuController
 
MolgenisMenuController.VoidPluginController - Class in org.molgenis.ui
Plugin without content
molgenisPluginInterceptor() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
MolgenisRootController - Class in org.molgenis.ui
Redirects '/' to the active plugin in the main menu
MolgenisRootController() - Constructor for class org.molgenis.ui.MolgenisRootController
 
MolgenisRSQL - Class in org.molgenis.data.rsql
Rsql/fiql parser
MolgenisRSQL(RSQLParser) - Constructor for class org.molgenis.data.rsql.MolgenisRSQL
 
MolgenisRSQLVisitor - Class in org.molgenis.data.rsql
RSQLVisitor implementation that creates Query objects for an RSQL tree.
MolgenisRSQLVisitor(EntityType) - Constructor for class org.molgenis.data.rsql.MolgenisRSQLVisitor
 
MolgenisStyleException - Exception in org.molgenis.ui.style
 
MolgenisStyleException(String) - Constructor for exception org.molgenis.ui.style.MolgenisStyleException
 
MolgenisStyleException(String, IOException) - Constructor for exception org.molgenis.ui.style.MolgenisStyleException
 
molgenisUi() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
MolgenisUiMenuPermissionDecorator - Class in org.molgenis.ui.security
 
MolgenisUiMenuPermissionDecorator(UiMenu, PermissionService) - Constructor for class org.molgenis.ui.security.MolgenisUiMenuPermissionDecorator
 
MolgenisUiPermissionDecorator - Class in org.molgenis.ui.security
 
MolgenisUiPermissionDecorator(Ui, PermissionService) - Constructor for class org.molgenis.ui.security.MolgenisUiPermissionDecorator
 
MolgenisUiUtils - Class in org.molgenis.ui
 
MolgenisUiUtils() - Constructor for class org.molgenis.ui.MolgenisUiUtils
 
MolgenisWebAppConfig - Class in org.molgenis.ui
 
MolgenisWebAppConfig() - Constructor for class org.molgenis.ui.MolgenisWebAppConfig
 
MolgenisWebAppInitializer - Class in org.molgenis.ui
 
MolgenisWebAppInitializer() - Constructor for class org.molgenis.ui.MolgenisWebAppInitializer
 
multipartResolver() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 

N

NAME - Static variable in class org.molgenis.data.system.core.FreemarkerTemplateMetaData
 
name - Variable in class org.molgenis.ui.MenuType
 
name - Variable in class org.molgenis.ui.Molgenis
 
name - Variable in class org.molgenis.ui.PluginType
 
NAME - Static variable in class org.molgenis.ui.style.StyleSheetMetadata
 
next(HttpServletRequest, HttpServletResponse, Wizard, BindingResult, Model) - Method in class org.molgenis.ui.wizard.AbstractWizardController
 
next() - Method in class org.molgenis.ui.wizard.Wizard
 

O

ObjectFactory - Class in org.molgenis.ui
This object contains factory methods for each Java content interface and Java element interface generated in the org.molgenis.ui package.
ObjectFactory() - Constructor for class org.molgenis.ui.ObjectFactory
Create a new ObjectFactory that can be used to create new instances of schema derived classes for package: org.molgenis.ui
onInit(HttpServletRequest) - Method in class org.molgenis.ui.wizard.AbstractWizardController
 
onStartup(ServletContext, Class<?>, boolean) - Method in class org.molgenis.ui.MolgenisWebAppInitializer
 
onStartup(ServletContext, Class<?>, int) - Method in class org.molgenis.ui.MolgenisWebAppInitializer
A Molgenis common web application initializer
OptionsWizardPage - Class in org.molgenis.data.importer.wizard
 
OptionsWizardPage(FileRepositoryCollectionFactory, ImportServiceFactory, DataService) - Constructor for class org.molgenis.data.importer.wizard.OptionsWizardPage
 
org.molgenis.data.config - package org.molgenis.data.config
 
org.molgenis.data.importer.wizard - package org.molgenis.data.importer.wizard
 
org.molgenis.data.index.admin - package org.molgenis.data.index.admin
 
org.molgenis.data.rsql - package org.molgenis.data.rsql
 
org.molgenis.data.support - package org.molgenis.data.support
 
org.molgenis.data.system.core - package org.molgenis.data.system.core
 
org.molgenis.file - package org.molgenis.file
 
org.molgenis.messageconverter - package org.molgenis.messageconverter
 
org.molgenis.ui - package org.molgenis.ui
 
org.molgenis.ui.admin.log - package org.molgenis.ui.admin.log
 
org.molgenis.ui.admin.permission - package org.molgenis.ui.admin.permission
 
org.molgenis.ui.admin.user - package org.molgenis.ui.admin.user
 
org.molgenis.ui.admin.usermanager - package org.molgenis.ui.admin.usermanager
 
org.molgenis.ui.browserdetection - package org.molgenis.ui.browserdetection
 
org.molgenis.ui.controller - package org.molgenis.ui.controller
 
org.molgenis.ui.converter - package org.molgenis.ui.converter
 
org.molgenis.ui.freemarker - package org.molgenis.ui.freemarker
 
org.molgenis.ui.jobs - package org.molgenis.ui.jobs
 
org.molgenis.ui.menu - package org.molgenis.ui.menu
 
org.molgenis.ui.menu.json - package org.molgenis.ui.menu.json
 
org.molgenis.ui.menumanager - package org.molgenis.ui.menumanager
 
org.molgenis.ui.security - package org.molgenis.ui.security
 
org.molgenis.ui.settings - package org.molgenis.ui.settings
 
org.molgenis.ui.settingsmanager - package org.molgenis.ui.settingsmanager
 
org.molgenis.ui.style - package org.molgenis.ui.style
 
org.molgenis.ui.thememanager - package org.molgenis.ui.thememanager
 
org.molgenis.ui.wizard - package org.molgenis.ui.wizard
 
org.molgenis.util - package org.molgenis.util
 

P

PackageWizardPage - Class in org.molgenis.data.importer.wizard
 
PackageWizardPage(FileRepositoryCollectionFactory, ImportServiceFactory, MetaDataService) - Constructor for class org.molgenis.data.importer.wizard.PackageWizardPage
 
parse(String, Attribute) - Method in class org.molgenis.data.rsql.RSQLValueParser
 
PermissionManagerController - Class in org.molgenis.ui.admin.permission
 
PermissionManagerController(PermissionManagerService, UserAuthorityFactory, GroupAuthorityFactory) - Constructor for class org.molgenis.ui.admin.permission.PermissionManagerController
 
PluginType - Class in org.molgenis.ui
Java class for pluginType complex type.
PluginType() - Constructor for class org.molgenis.ui.PluginType
 
populate() - Method in class org.molgenis.ui.style.BootstrapThemePopulator
Populate the database with the available bootstrap themes found in the jar.
postHandle(HttpServletRequest, HttpServletResponse, Object, ModelAndView) - Method in class org.molgenis.ui.MolgenisInterceptor
 
previous(HttpServletResponse, Wizard) - Method in class org.molgenis.ui.wizard.AbstractWizardController
 
previous() - Method in class org.molgenis.ui.wizard.Wizard
 
properties() - Static method in class org.molgenis.ui.MolgenisWebAppConfig
 

Q

QueryRsql - Class in org.molgenis.data.rsql
Create MOLGENIS Query from RSQL node based on entity meta data.
QueryRsql(Node) - Constructor for class org.molgenis.data.rsql.QueryRsql
 

R

RdfConverter - Class in org.molgenis.ui.converter
 
RdfConverter() - Constructor for class org.molgenis.ui.converter.RdfConverter
 
RDFMediaType - Class in org.molgenis.ui.converter
 
RDFMediaType() - Constructor for class org.molgenis.ui.converter.RDFMediaType
 
rdfMediaTypes - Static variable in class org.molgenis.ui.converter.RDFMediaType
 
readInternal(Class<? extends EntityCollection>, HttpInputMessage) - Method in class org.molgenis.messageconverter.CsvHttpMessageConverter
 
readInternal(Class<? extends Model>, HttpInputMessage) - Method in class org.molgenis.ui.converter.RdfConverter
 
rebuildIndex(String) - Method in interface org.molgenis.data.index.admin.IndexManagerService
Rebuilds the index for the given entity type
rebuildIndex(String) - Method in class org.molgenis.data.index.admin.IndexManagerServiceImpl
 
redirect(String) - Method in class org.molgenis.ui.controller.RedirectController
 
RedirectController - Class in org.molgenis.ui.controller
Plugin that redirects the user to another url.
RedirectController() - Constructor for class org.molgenis.ui.controller.RedirectController
 
reindexType(IndexManagerController.ReindexRequest) - Method in class org.molgenis.data.index.admin.IndexManagerController
 
removeUserFromGroup(String, String) - Method in interface org.molgenis.ui.admin.usermanager.UserManagerService
 
removeUserFromGroup(String, String) - Method in class org.molgenis.ui.admin.usermanager.UserManagerServiceImpl
 
RepositoryTemplateLoader - Class in org.molgenis.ui.freemarker
Loads FreemarkerTemplates from a repository.
RepositoryTemplateLoader(DataService) - Constructor for class org.molgenis.ui.freemarker.RepositoryTemplateLoader
 
RepositoryTemplateLoader.TemplateSource - Class in org.molgenis.ui.freemarker
Template source class.
resetLoggers() - Method in class org.molgenis.ui.admin.log.LogManagerController
 
resetTwoFactorAuthentication() - Method in class org.molgenis.ui.admin.user.UserAccountController
 
resourceFingerprintRegistry() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
restart(HttpServletRequest, HttpSession) - Method in class org.molgenis.ui.wizard.AbstractWizardController
 
restTemplate() - Method in class org.molgenis.data.config.HttpClientConfig
 
RSQLValueParser - Class in org.molgenis.data.rsql
Converts RSQL value symbols to the relevant data type.
RSQLValueParser() - Constructor for class org.molgenis.data.rsql.RSQLValueParser
 
runNow(String) - Method in class org.molgenis.ui.jobs.JobsController
 

S

save(Menu) - Method in class org.molgenis.ui.menumanager.MenuManagerController
 
saveMenu(Menu) - Method in interface org.molgenis.ui.menumanager.MenuManagerService
 
saveMenu(Menu) - Method in class org.molgenis.ui.menumanager.MenuManagerServiceImpl
 
ScheduledJobsController - Class in org.molgenis.ui.jobs
 
ScheduledJobsController() - Constructor for class org.molgenis.ui.jobs.ScheduledJobsController
 
serialize(Entity, Type, JsonSerializationContext) - Method in class org.molgenis.util.EntitySerializer
 
setActivationGroup(String, Boolean) - Method in interface org.molgenis.ui.admin.usermanager.UserManagerService
 
setActivationGroup(String, Boolean) - Method in class org.molgenis.ui.admin.usermanager.UserManagerServiceImpl
 
setActivationUser(String, Boolean) - Method in interface org.molgenis.ui.admin.usermanager.UserManagerService
 
setActivationUser(String, Boolean) - Method in class org.molgenis.ui.admin.usermanager.UserManagerServiceImpl
 
setActive(Boolean) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.Activation
 
setAggregateThreshold(Integer) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setBootstrap3Theme(FileMeta) - Method in class org.molgenis.ui.style.StyleSheet
 
setBootstrap4Theme(FileMeta) - Method in class org.molgenis.ui.style.StyleSheet
 
setBootstrapTheme(String) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setBootstrapTheme(String) - Method in class org.molgenis.ui.thememanager.ThemeManagerController
Set a new bootstrap theme
setContent(String) - Method in class org.molgenis.ui.settings.StaticContent
 
setCssHref(String) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setCustomJavascript(String) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setDefaultEntity(String) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setDescription(String) - Method in class org.molgenis.ui.Molgenis
Sets the value of the description property.
setEmail(String) - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
setEntitiesImportable(Map<String, Boolean>) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setEntitiesInDefaultPackage(List<String>) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setEntityImportOption(String) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setErrorMessage(String) - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
setFeedback(String) - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
setFieldsAvailable(Map<String, Collection<String>>) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setFieldsDetected(Map<String, Collection<String>>) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setFieldsRequired(Map<String, Collection<String>>) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setFieldsUnknown(Map<String, Collection<String>>) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setFile(File) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setFooter(String) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setGoogleAnalyticsAccountPrivacyFriendly(boolean) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setGoogleAnalyticsIpAnonymization(boolean) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setGoogleAnalyticsTrackingId(String) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setGoogleAnalyticsTrackingIdMolgenis(String) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setGroupId(String) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.GroupMembership
 
setGroups(Iterable<Group>) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setId(String) - Method in class org.molgenis.data.system.core.FreemarkerTemplate
 
setId(String) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.Activation
 
setId(String) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.ActivationResponse
 
setId(String) - Method in class org.molgenis.ui.menu.MenuItem
 
setId(String) - Method in class org.molgenis.ui.PluginType
Sets the value of the id property.
setId(String) - Method in class org.molgenis.ui.style.StyleSheet
 
setImportedEntities(List<String>) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setImportResult(EntityImportReport) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setImportRunId(String) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setItems(List<MenuItem>) - Method in class org.molgenis.ui.menu.MenuItem
 
setLabel(String) - Method in class org.molgenis.ui.menu.MenuItem
 
setLabel(String) - Method in class org.molgenis.ui.MenuType
Sets the value of the label property.
setLabel(String) - Method in class org.molgenis.ui.Molgenis
Sets the value of the label property.
setLanguageCode(String) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setLogoNavBarHref(String) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setLogoTopHref(String) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setMember(Boolean) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.GroupMembership
 
setMenu(MenuType) - Method in class org.molgenis.ui.Molgenis
Sets the value of the menu property.
setMenu(String) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setMustChangeEntityName(boolean) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setName(String) - Method in class org.molgenis.data.system.core.FreemarkerTemplate
 
setName(String) - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
setName(String) - Method in class org.molgenis.ui.MenuType
Sets the value of the name property.
setName(String) - Method in class org.molgenis.ui.Molgenis
Sets the value of the name property.
setName(String) - Method in class org.molgenis.ui.PluginType
Sets the value of the name property.
setName(String) - Method in class org.molgenis.ui.style.StyleSheet
 
setPackages(List<String>) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setParams(String) - Method in class org.molgenis.ui.menu.MenuItem
 
setSelectedStyle(String) - Method in interface org.molgenis.ui.style.StyleService
Set the runtime property that controls the css style with a selected style
setSelectedStyle(String) - Method in class org.molgenis.ui.style.StyleServiceImpl
 
setSubject(String) - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
setSubmitted(boolean) - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
setSuccess(boolean) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.ActivationResponse
 
setSuccess(boolean) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.GroupMembershipResponse
 
setSupportedDatabaseActions(List<DatabaseAction>) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
SettingsManagerController - Class in org.molgenis.ui.settingsmanager
 
SettingsManagerController() - Constructor for class org.molgenis.ui.settingsmanager.SettingsManagerController
 
setTitle(String) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setTrackingCodeFooter(String) - Method in class org.molgenis.ui.settings.AppDbSettings
 
setType(String) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.Activation
 
setType(String) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.ActivationResponse
 
setType(MenuItemType) - Method in class org.molgenis.ui.menu.MenuItem
 
setUrl(String) - Method in class org.molgenis.ui.PluginType
Sets the value of the url property.
setUserId(String) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.GroupMembership
 
setUserId(String) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController.GroupMembershipResponse
 
setValidationMessage(String) - Method in class org.molgenis.data.importer.wizard.ImportWizard
 
setValue(String) - Method in class org.molgenis.data.system.core.FreemarkerTemplate
 
setViewState(String, Model) - Method in class org.molgenis.ui.admin.usermanager.UserManagerController
 
showAccount(Model, boolean) - Method in class org.molgenis.ui.admin.user.UserAccountController
 
STATIC_CONTENT - Static variable in class org.molgenis.ui.settings.StaticContentMeta
 
StaticContent - Class in org.molgenis.ui.settings
 
StaticContent(Entity) - Constructor for class org.molgenis.ui.settings.StaticContent
 
StaticContent(EntityType) - Constructor for class org.molgenis.ui.settings.StaticContent
 
StaticContent(String, EntityType) - Constructor for class org.molgenis.ui.settings.StaticContent
 
StaticContentFactory - Class in org.molgenis.ui.settings
 
StaticContentFactory(StaticContentMeta, EntityPopulator) - Constructor for class org.molgenis.ui.settings.StaticContentFactory
 
StaticContentMeta - Class in org.molgenis.ui.settings
 
StaticContentService - Interface in org.molgenis.ui.controller
Controller that handles static content pages requests
StaticContentServiceImpl - Class in org.molgenis.ui.controller
Controller that handles static content pages requests.
StaticContentServiceImpl(DataService, StaticContentFactory, PermissionService) - Constructor for class org.molgenis.ui.controller.StaticContentServiceImpl
 
Style - Class in org.molgenis.ui.style
 
Style() - Constructor for class org.molgenis.ui.style.Style
 
STYLE_SHEET - Static variable in class org.molgenis.ui.style.StyleSheetMetadata
 
StyleController - Class in org.molgenis.ui.style
 
StyleController(StyleService) - Constructor for class org.molgenis.ui.style.StyleController
 
StyleService - Interface in org.molgenis.ui.style
 
StyleServiceImpl - Class in org.molgenis.ui.style
 
StyleServiceImpl(AppSettings, IdGenerator, FileStore, FileMetaFactory, StyleSheetFactory, DataService) - Constructor for class org.molgenis.ui.style.StyleServiceImpl
 
StyleSheet - Class in org.molgenis.ui.style
 
StyleSheet(Entity) - Constructor for class org.molgenis.ui.style.StyleSheet
 
StyleSheet(EntityType) - Constructor for class org.molgenis.ui.style.StyleSheet
 
StyleSheet(String, EntityType) - Constructor for class org.molgenis.ui.style.StyleSheet
 
StyleSheetFactory - Class in org.molgenis.ui.style
 
StyleSheetMetadata - Class in org.molgenis.ui.style
 
StyleSheetMetadata(SettingsPackage, FileMetaMetaData) - Constructor for class org.molgenis.ui.style.StyleSheetMetadata
 
StyleSheetRepositoryDecorator - Class in org.molgenis.ui.style
Repository decorator that updates StyleSheet on StyleSheet changes.
StyleSheetRepositoryDecorator(Repository<StyleSheet>, AppSettings) - Constructor for class org.molgenis.ui.style.StyleSheetRepositoryDecorator
 
StyleSheetRepositoryDecoratorFactory - Class in org.molgenis.ui.style
 
StyleSheetRepositoryDecoratorFactory(StyleSheetMetadata, AppDbSettings, DataService) - Constructor for class org.molgenis.ui.style.StyleSheetRepositoryDecoratorFactory
 
submitContent(String, Model) - Method in class org.molgenis.ui.controller.AbstractStaticContentController
 
submitContent(String, String) - Method in interface org.molgenis.ui.controller.StaticContentService
 
submitContent(String, String) - Method in class org.molgenis.ui.controller.StaticContentServiceImpl
 
submitFeedback(FeedbackController.FeedbackForm, CaptchaRequest) - Method in class org.molgenis.ui.controller.FeedbackController
Handles feedback form submission.
supports(Class<?>) - Method in class org.molgenis.messageconverter.CsvHttpMessageConverter
 
supports(Class<?>) - Method in class org.molgenis.ui.converter.RdfConverter
 
supports(ConfigAttribute) - Method in class org.molgenis.ui.security.MolgenisAccessDecisionVoter
 
supports(Class<?>) - Method in class org.molgenis.ui.security.MolgenisAccessDecisionVoter
 

T

TemplateSource(FreemarkerTemplate) - Constructor for class org.molgenis.ui.freemarker.RepositoryTemplateLoader.TemplateSource
 
TEXT_RDF_N3 - Static variable in class org.molgenis.ui.converter.RDFMediaType
 
TEXT_TURTLE - Static variable in class org.molgenis.ui.converter.RDFMediaType
 
TEXT_TURTLE_VALUE - Static variable in class org.molgenis.ui.converter.RDFMediaType
 
themeFingerprintRegistry() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
ThemeFingerprintRegistry - Class in org.molgenis.ui.style
 
ThemeFingerprintRegistry(StyleService) - Constructor for class org.molgenis.ui.style.ThemeFingerprintRegistry
 
ThemeManagerController - Class in org.molgenis.ui.thememanager
 
ThemeManagerController(StyleService) - Constructor for class org.molgenis.ui.thememanager.ThemeManagerController
 
toDatabaseAction(String) - Static method in class org.molgenis.data.importer.wizard.ImportWizardUtil
 
toString() - Method in class org.molgenis.ui.controller.FeedbackController.FeedbackForm
 
toString() - Method in class org.molgenis.ui.freemarker.RepositoryTemplateLoader.TemplateSource
 
toString() - Method in class org.molgenis.ui.menu.MenuItem
 

U

updateAccount(AccountUpdateRequest) - Method in class org.molgenis.ui.admin.user.UserAccountController
 
updateGroupEntityClassPermissions(String, WebRequest) - Method in class org.molgenis.ui.admin.permission.PermissionManagerController
 
updateGroupPluginPermissions(String, WebRequest) - Method in class org.molgenis.ui.admin.permission.PermissionManagerController
 
updateLogLevel(String, String) - Method in class org.molgenis.ui.admin.log.LogManagerController
 
updateUserEntityClassPermissions(String, WebRequest) - Method in class org.molgenis.ui.admin.permission.PermissionManagerController
 
updateUserLanguage(String) - Method in class org.molgenis.ui.admin.user.UserAccountController
 
updateUserPluginPermissions(String, WebRequest) - Method in class org.molgenis.ui.admin.permission.PermissionManagerController
 
uploadLogo(File) - Method in class org.molgenis.ui.menumanager.MenuManagerController
 
uploadLogo(Part, Model) - Method in class org.molgenis.ui.menumanager.MenuManagerController
Upload a new molgenis logo
UploadWizardPage - Class in org.molgenis.data.importer.wizard
 
UploadWizardPage(ImportServiceFactory, FileRepositoryCollectionFactory) - Constructor for class org.molgenis.data.importer.wizard.UploadWizardPage
 
URI - Static variable in class org.molgenis.data.importer.wizard.ImportWizardController
 
URI - Static variable in class org.molgenis.data.index.admin.IndexManagerController
 
URI - Static variable in class org.molgenis.file.FileDownloadController
 
URI - Static variable in class org.molgenis.ui.admin.log.LogManagerController
 
URI - Static variable in class org.molgenis.ui.admin.permission.PermissionManagerController
 
URI - Static variable in class org.molgenis.ui.admin.user.UserAccountController
 
URI - Static variable in class org.molgenis.ui.admin.usermanager.UserManagerController
 
URI - Static variable in class org.molgenis.ui.controller.FeedbackController
 
URI - Static variable in class org.molgenis.ui.controller.RedirectController
 
URI - Static variable in class org.molgenis.ui.jobs.JobsController
 
URI - Static variable in class org.molgenis.ui.jobs.ScheduledJobsController
 
URI - Static variable in class org.molgenis.ui.menumanager.MenuManagerController
 
URI - Static variable in class org.molgenis.ui.MolgenisMenuController
 
URI - Static variable in class org.molgenis.ui.MolgenisMenuController.VoidPluginController
 
URI - Static variable in class org.molgenis.ui.settingsmanager.SettingsManagerController
 
URI - Static variable in class org.molgenis.ui.thememanager.ThemeManagerController
 
url - Variable in class org.molgenis.ui.PluginType
 
UserAccountController - Class in org.molgenis.ui.admin.user
 
UserAccountController(UserAccountService, RecoveryService, TwoFactorAuthenticationService, AuthenticationSettings) - Constructor for class org.molgenis.ui.admin.user.UserAccountController
 
UserManagerController - Class in org.molgenis.ui.admin.usermanager
 
UserManagerController(UserManagerService) - Constructor for class org.molgenis.ui.admin.usermanager.UserManagerController
 
UserManagerController.Activation - Class in org.molgenis.ui.admin.usermanager
 
UserManagerController.ActivationResponse - Class in org.molgenis.ui.admin.usermanager
 
UserManagerController.GroupMembership - Class in org.molgenis.ui.admin.usermanager
 
UserManagerController.GroupMembershipResponse - Class in org.molgenis.ui.admin.usermanager
 
UserManagerService - Interface in org.molgenis.ui.admin.usermanager
 
UserManagerServiceImpl - Class in org.molgenis.ui.admin.usermanager
Manage user in groups
UserManagerServiceImpl(DataService, GroupMemberFactory) - Constructor for class org.molgenis.ui.admin.usermanager.UserManagerServiceImpl
 
UserViewData - Class in org.molgenis.ui.admin.usermanager
 

V

validateImportWizard(Wizard) - Static method in class org.molgenis.data.importer.wizard.ImportWizardUtil
 
validateMolgenisServerProperties() - Method in class org.molgenis.ui.MolgenisWebAppConfig
 
ValidationResultWizardPage - Class in org.molgenis.data.importer.wizard
 
ValidationResultWizardPage() - Constructor for class org.molgenis.data.importer.wizard.ValidationResultWizardPage
 
VALUE - Static variable in class org.molgenis.data.system.core.FreemarkerTemplateMetaData
 
valueOf(String) - Static method in enum org.molgenis.ui.menu.MenuItemType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.molgenis.ui.style.BootstrapVersion
Returns the enum constant of this type with the specified name.
values() - Static method in enum org.molgenis.ui.menu.MenuItemType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.molgenis.ui.style.BootstrapVersion
Returns an array containing the constants of this enum type, in the order they are declared.
viewJob(Model, String, Integer) - Method in class org.molgenis.ui.jobs.JobsController
 
viewResolver() - Method in class org.molgenis.ui.MolgenisWebAppConfig
Enable spring freemarker viewresolver.
visit(AndNode) - Method in class org.molgenis.data.rsql.AggregateQueryRsqlVisitor
 
visit(OrNode) - Method in class org.molgenis.data.rsql.AggregateQueryRsqlVisitor
 
visit(ComparisonNode) - Method in class org.molgenis.data.rsql.AggregateQueryRsqlVisitor
 
visit(AndNode) - Method in class org.molgenis.data.rsql.MolgenisRSQLVisitor
 
visit(OrNode) - Method in class org.molgenis.data.rsql.MolgenisRSQLVisitor
 
visit(ComparisonNode) - Method in class org.molgenis.data.rsql.MolgenisRSQLVisitor
 
VoidPluginController() - Constructor for class org.molgenis.ui.MolgenisMenuController.VoidPluginController
 
vote(Authentication, FilterInvocation, Collection<ConfigAttribute>) - Method in class org.molgenis.ui.security.MolgenisAccessDecisionVoter
 
VuePluginController - Class in org.molgenis.ui.controller
 
VuePluginController(String, MenuReaderService, LanguageService, AppSettings, UserAccountService) - Constructor for class org.molgenis.ui.controller.VuePluginController
 

W

wizard(HttpSession) - Method in class org.molgenis.ui.wizard.AbstractWizardController
 
Wizard - Class in org.molgenis.ui.wizard
 
Wizard() - Constructor for class org.molgenis.ui.wizard.Wizard
 
WizardButton - Class in org.molgenis.ui.wizard
 
WizardButton(String, String, boolean, String) - Constructor for class org.molgenis.ui.wizard.WizardButton
 
WizardPage - Interface in org.molgenis.ui.wizard
 
writeInternal(EntityCollection, HttpOutputMessage) - Method in class org.molgenis.messageconverter.CsvHttpMessageConverter
 
writeInternal(Model, HttpOutputMessage) - Method in class org.molgenis.ui.converter.RdfConverter
 

X

XmlMolgenisUi - Class in org.molgenis.ui
Deprecated.
use MenuMolgenisUi instead
XmlMolgenisUi(XmlMolgenisUiLoader, PermissionService) - Constructor for class org.molgenis.ui.XmlMolgenisUi
Deprecated.
 
XmlMolgenisUiLoader - Class in org.molgenis.ui
 
XmlMolgenisUiLoader() - Constructor for class org.molgenis.ui.XmlMolgenisUiLoader
 
XmlMolgenisUiMenu - Class in org.molgenis.ui
Deprecated.
XmlMolgenisUiMenu(MenuType, PermissionService) - Constructor for class org.molgenis.ui.XmlMolgenisUiMenu
Deprecated.
 
XmlMolgenisUiMenu(MenuType, UiMenu, PermissionService) - Constructor for class org.molgenis.ui.XmlMolgenisUiMenu
Deprecated.
 
XmlMolgenisUiPlugin - Class in org.molgenis.ui
Deprecated.
XmlMolgenisUiPlugin(PluginType, UiMenu, PermissionService) - Constructor for class org.molgenis.ui.XmlMolgenisUiPlugin
Deprecated.
 
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