Package org.uniprot.uniprot

package org.uniprot.uniprot

Classes

Class	Description
CitationType	Describes different types of citations.
CofactorType	Describes a cofactor.
CommentType	Describes different types of general annotations.
CommentType.Absorption	Java class for anonymous complex type
CommentType.Conflict	Java class for anonymous complex type
CommentType.Conflict.Sequence	Java class for anonymous complex type
CommentType.Disease	Java class for anonymous complex type
CommentType.Kinetics	Java class for anonymous complex type
CommentType.Link	Java class for anonymous complex type
CommentType.PhDependence	Java class for anonymous complex type
CommentType.RedoxPotential	Java class for anonymous complex type
CommentType.TemperatureDependence	Java class for anonymous complex type
ConsortiumType	Describes the authors of a citation when these are represented by a consortium.
DbReferenceType	Describes a database cross-reference.
Entry	Java class for anonymous complex type
EventType	Describes the type of events that cause alternative products.
EvidencedStringType	Java class for evidencedStringType complex type
EvidenceType	Describes the evidence for an annotation.
FeatureType	Describes different types of sequence annotations.
GeneLocationType	Describes non-nuclear gene locations (organelles and plasmids).
GeneNameType	Describes different types of gene designations.
GeneType	Describes a gene.
ImportedFromType	Describes the source of the evidence, when it is not assigned by UniProt, but imported from an external database.
InteractantType	Java class for interactantType complex type
IsoformType	Describes isoforms in 'alternative products' annotations.
IsoformType.Name	Java class for anonymous complex type
IsoformType.Sequence	Java class for anonymous complex type
KeywordType	Java class for keywordType complex type
LigandPartType	Describes a ligand part.
LigandType	Describes a ligand.
LocationType	Describes a sequence location as either a range with a begin and end or as a position.
MoleculeType	Describes a molecule by name or unique identifier.
NameListType	Java class for nameListType complex type
ObjectFactory	This object contains factory methods for each Java content interface and Java element interface generated in the org.uniprot.uniprot package.
OrganismNameType	Describes different types of source organism names.
OrganismType	Describes the source organism.
OrganismType.Lineage	Java class for anonymous complex type
PersonType	Java class for personType complex type
PhysiologicalReactionType	Describes a physiological reaction.
PositionType	Java class for positionType complex type
PropertyType	Java class for propertyType complex type
ProteinExistenceType	Describes the evidence for the protein's existence.
ProteinType	Describes the names for the protein and parts thereof.
ProteinType.AlternativeName	Java class for anonymous complex type
ProteinType.Component	Java class for anonymous complex type
ProteinType.Domain	Java class for anonymous complex type
ProteinType.RecommendedName	Java class for anonymous complex type
ProteinType.SubmittedName	Java class for anonymous complex type
ReactionType	Describes a chemical reaction.
ReferenceType	Describes a citation and a summary of its content.
SequenceType	Java class for sequenceType complex type
SourceDataType	Describes the source of the sequence according to the citation.
SourceDataType.Plasmid	Java class for anonymous complex type
SourceDataType.Strain	Java class for anonymous complex type
SourceDataType.Tissue	Java class for anonymous complex type
SourceDataType.Transposon	Java class for anonymous complex type
SourceType	Describes the source of the data using a database cross-reference (or a 'ref' attribute when the source cannot be found in a public data source, such as PubMed, and is cited only within the UniProtKB entry).
StatusType	Indicates whether the name of a plasmid is known or unknown.
SubcellularLocationType	Describes the subcellular location and optionally the topology and orientation of a molecule.
Uniprot	Java class for anonymous complex type